Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
---|---|---|---|---|---|---|---|---|---|
KIRP | rs11161425 | chr15:24511220 | A/C | 0.000138 | 207 | 17.52 | 14.32 | 10.23 | KM Plot |
KIRP | rs11161429 | chr15:24542527 | G/A | 3.07E-5 | 210 | 17.52 | 13.97 | 10.23 | KM Plot |
KIRP | rs111649922 | chr4:88257233 | C/A | 0.000646 | 206 | 16.53 | 15.33 | 12.47 | KM Plot |
KIRP | rs11165251 | chr1:95267890 | A/G | 2.01E-6 | 204 | 16.45 | 15.33 | 11.43 | KM Plot |
KIRP | rs111657681 | chr16:20464239 | C/G | 0.000589 | 210 | 16.43 | 13.07 | 11.43 | KM Plot |
KIRP | rs111675822 | chr14:59937289 | CCTAA/C | 3.85E-5 | 212 | 16.47 | 15.07 | 6.63 | KM Plot |
KIRP | rs111692241 | chr5:79895438 | G/C | 6.88E-7 | 210 | 18 | 14.4 | 7.47 | KM Plot |
KIRP | rs111758996 | chr14:59997113 | A/G | 0.000251 | 212 | 16.43 | 16.53 | 11.2 | KM Plot |
KIRP | rs111774591 | chr10:74924054 | G/A | 6.29E-12 | 212 | 16.53 | 11.77 | 5.6 | KM Plot |
KIRP | rs111835307 | chr4:88201945 | T/G | 0.000555 | 211 | 17.02 | 12.13 | 12.47 | KM Plot |
KIRP | rs111876050 | chr14:59994667 | T/C | 0.000205 | 213 | 16.43 | 18 | 11.2 | KM Plot |
KIRP | rs111882043 | chr14:59899356 | T/C | 0.000114 | 213 | 16.43 | 16.05 | 6.63 | KM Plot |
KIRP | rs111894649 | chr14:23728632 | C/CT | 6.77E-5 | 204 | 16.43 | 18.25 | 16.53 | KM Plot |
KIRP | rs111908418 | chr15:24524700 | C/T | 8.91E-5 | 206 | 17.02 | 14.32 | 10.63 | KM Plot |
KIRP | rs111988644 | chr10:74872802 | C/T | 5.34E-12 | 213 | 16.73 | 11.77 | 5.6 | KM Plot |